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PSME_00048951-RA


Description : (at2g24765 : 142.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (o48920|arf_vigun : 95.5) ADP-ribosylation factor - Vigna unguiculata (Cowpea) & (reliability: 284.0) & (original description: no original description)


Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048951-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Bradi1g53867 No alias Ras-related small GTP-binding family protein 0.02 Orthogroups_2024-Update
Brara.B01986.1 No alias ARF-GTPase *(ARF1) 0.02 Orthogroups_2024-Update
Brara.E03537.1 No alias ARF-GTPase *(ARFA) 0.02 Orthogroups_2024-Update
Mp7g13050.1 No alias ARF-GTPase 0.01 Orthogroups_2024-Update
Seita.1G284400.1 No alias ARF-GTPase *(ARFA) 0.03 Orthogroups_2024-Update
Seita.6G096900.1 No alias ARF-GTPase *(ARFE) 0.03 Orthogroups_2024-Update
Sobic.003G122200.1 No alias ARF-GTPase *(ARF1) 0.05 Orthogroups_2024-Update
Sobic.004G271700.1 No alias ARF-GTPase *(ARFA) 0.03 Orthogroups_2024-Update
Solyc04g025560 No alias ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN) 0.03 Orthogroups_2024-Update
evm.model.contig_2150.15 No alias (at3g62290 : 301.0) A member of ARF GTPase family. A... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 65 165
No external refs found!