PSME_00049059-RA


Description : (at1g29860 : 114.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049059-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
29146 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
66769 No alias WRKY family transcription factor family protein 0.02 Orthogroups_2024-Update
81371 No alias WRKY DNA-binding protein 9 0.04 Orthogroups_2024-Update
A4A49_10325 No alias putative wrky transcription factor 40 0.03 Orthogroups_2024-Update
A4A49_11091 No alias wrky transcription factor 22 0.02 Orthogroups_2024-Update
A4A49_13674 No alias putative wrky transcription factor 48 0.02 Orthogroups_2024-Update
A4A49_19262 No alias putative wrky transcription factor 40 0.03 Orthogroups_2024-Update
A4A49_19554 No alias putative wrky transcription factor 70 0.03 Orthogroups_2024-Update
A4A49_22277 No alias putative wrky transcription factor 70 0.02 Orthogroups_2024-Update
A4A49_26487 No alias putative wrky transcription factor 65 0.04 Orthogroups_2024-Update
A4A49_33088 No alias putative wrky transcription factor 72 0.02 Orthogroups_2024-Update
At1g30650 No alias Probable WRKY transcription factor 14... 0.02 Orthogroups_2024-Update
At1g66550 No alias Probable WRKY transcription factor 67... 0.03 Orthogroups_2024-Update
At1g80840 No alias Probable WRKY transcription factor 40... 0.03 Orthogroups_2024-Update
At2g25000 No alias Probable WRKY transcription factor 60... 0.03 Orthogroups_2024-Update
At2g30250 No alias Probable WRKY transcription factor 25... 0.03 Orthogroups_2024-Update
At2g38470 No alias WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4] 0.04 Orthogroups_2024-Update
At4g23810 No alias Probable WRKY transcription factor 53... 0.03 Orthogroups_2024-Update
At4g39410 No alias WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80] 0.02 Orthogroups_2024-Update
Bradi1g22680 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Bradi1g47690 No alias WRKY family transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi1g63220 No alias WRKY DNA-binding protein 70 0.02 Orthogroups_2024-Update
Bradi1g63910 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi2g00280 No alias WRKY DNA-binding protein 26 0.03 Orthogroups_2024-Update
Bradi2g05500 No alias WRKY DNA-binding protein 61 0.03 Orthogroups_2024-Update
Bradi2g08620 No alias WRKY family transcription factor 0.05 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.05 Orthogroups_2024-Update
Bradi2g22241 No alias WRKY DNA-binding protein 54 0.03 Orthogroups_2024-Update
Bradi2g42023 No alias WRKY DNA-binding protein 50 0.04 Orthogroups_2024-Update
Bradi2g49906 No alias WRKY DNA-binding protein 65 0.03 Orthogroups_2024-Update
Bradi3g06070 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
Bradi3g09810 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi3g34850 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Bradi4g01950 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Bradi4g19060 No alias WRKY DNA-binding protein 75 0.05 Orthogroups_2024-Update
Bradi4g25717 No alias WRKY DNA-binding protein 55 0.02 Orthogroups_2024-Update
Bradi4g28280 No alias WRKY DNA-binding protein 46 0.03 Orthogroups_2024-Update
Bradi4g30360 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Bradi4g44342 No alias WRKY DNA-binding protein 70 0.04 Orthogroups_2024-Update
Brara.A00597.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.A01631.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B00003.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B02409.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C02270.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Brara.C04031.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I00520.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G012724 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
GRMZM2G024898 No alias WRKY DNA-binding protein 14 0.03 Orthogroups_2024-Update
GRMZM2G139815 No alias WRKY DNA-binding protein 30 0.03 Orthogroups_2024-Update
GRMZM2G327349 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
GRMZM5G871347 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G043300 No alias WRKY DNA-binding protein 72 0.04 Orthogroups_2024-Update
Glyma.01G224800 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.02G010900 No alias WRKY DNA-binding protein 23 0.04 Orthogroups_2024-Update
Glyma.02G232600 No alias WRKY DNA-binding protein 33 0.07 Orthogroups_2024-Update
Glyma.04G061400 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Glyma.05G160800 No alias WRKY DNA-binding protein 65 0.03 Orthogroups_2024-Update
Glyma.05G184500 No alias WRKY DNA-binding protein 51 0.04 Orthogroups_2024-Update
Glyma.06G147100 No alias WRKY DNA-binding protein 51 0.02 Orthogroups_2024-Update
Glyma.07G023300 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
Glyma.07G057400 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G262700 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G218600 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Glyma.08G320200 No alias WRKY family transcription factor 0.06 Orthogroups_2024-Update
Glyma.09G005700 No alias WRKY family transcription factor 0.06 Orthogroups_2024-Update
Glyma.10G138300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G310100 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G370100 No alias WRKY DNA-binding protein 40 0.01 Orthogroups_2024-Update
Glyma.14G200200 No alias WRKY DNA-binding protein 33 0.05 Orthogroups_2024-Update
Glyma.15G110300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G035400 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
Glyma.18G056600 No alias WRKY DNA-binding protein 33 0.01 Orthogroups_2024-Update
Glyma.18G092200 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G208800 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.18G263400 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.19G217000 No alias WRKY DNA-binding protein 35 0.03 Orthogroups_2024-Update
Glyma.19G217800 No alias WRKY DNA-binding protein 23 0.04 Orthogroups_2024-Update
HORVU0Hr1G012750.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G092130.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G020140.3 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G088200.5 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G096420.20 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g20550 No alias WRKY55, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48260 No alias WRKY47, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g29660 No alias WRKY69, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38990 No alias WRKY30, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g16510 No alias WRKY74, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g25070 No alias WRKY62, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g32250 No alias WRKY96, expressed 0.02 Orthogroups_2024-Update
MA_103616g0010 No alias (at4g22070 : 256.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_10425932g0020 No alias (at5g13080 : 160.0) WRKY75 is one of several... 0.03 Orthogroups_2024-Update
MA_11072g0010 No alias (at1g68150 : 82.4) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_126273g0010 No alias (at1g69310 : 166.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_179641g0010 No alias (at1g29860 : 118.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
MA_496691g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_53351g0010 No alias (at5g56270 : 326.0) WRKY transcription factor 2; WRKY... 0.04 Orthogroups_2024-Update
MA_54954g0010 No alias (at5g26170 : 109.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
MA_74833g0010 No alias (at5g15130 : 181.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_7513437g0010 No alias (at5g26170 : 113.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
MA_91468g0010 No alias (at4g01720 : 124.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_93790g0010 No alias (at1g29860 : 110.0) member of WRKY Transcription Factor;... 0.07 Orthogroups_2024-Update
Mp8g10640.1 No alias transcription factor (WRKY) 0.03 Orthogroups_2024-Update
PSME_00000342-RA No alias (at1g29280 : 114.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00010717-RA No alias (at4g22070 : 177.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
PSME_00015239-RA No alias (at1g18860 : 197.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00028885-RA No alias (at5g15130 : 194.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00028886-RA No alias (at5g15130 : 207.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00032293-RA No alias (at4g01720 : 163.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00035158-RA No alias (at3g01970 : 114.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00036210-RA No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.04 Orthogroups_2024-Update
PSME_00036434-RA No alias (at1g62300 : 153.0) Encodes a transcription factor... 0.05 Orthogroups_2024-Update
PSME_00037224-RA No alias (at2g38470 : 152.0) Member of the plant WRKY... 0.02 Orthogroups_2024-Update
PSME_00039002-RA No alias (at5g26170 : 112.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00042021-RA No alias (at4g22070 : 263.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
PSME_00048777-RA No alias (at4g23810 : 118.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00051212-RA No alias (at4g11070 : 110.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
PSME_00053369-RA No alias (at2g34830 : 184.0) member of WRKY Transcription Factor;... 0.01 Orthogroups_2024-Update
Potri.001G044500 No alias WRKY DNA-binding protein 40 0.04 Orthogroups_2024-Update
Potri.001G352400 No alias WRKY DNA-binding protein 28 0.04 Orthogroups_2024-Update
Potri.001G460600 No alias WRKY DNA-binding protein 14 0.02 Orthogroups_2024-Update
Potri.002G193000 No alias WRKY DNA-binding protein 23 0.05 Orthogroups_2024-Update
Potri.002G221600 No alias zinc-dependent activator protein-1 0.03 Orthogroups_2024-Update
Potri.003G138600 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Potri.003G169100 No alias WRKY DNA-binding protein 75 0.02 Orthogroups_2024-Update
Potri.004G007500 No alias WRKY family transcription factor 0.06 Orthogroups_2024-Update
Potri.006G224100 No alias WRKY DNA-binding protein 50 0.04 Orthogroups_2024-Update
Potri.007G078200 No alias WRKY DNA-binding protein 13 0.03 Orthogroups_2024-Update
Potri.007G079800 No alias WRKY DNA-binding protein 51 0.03 Orthogroups_2024-Update
Potri.011G007800 No alias WRKY family transcription factor 0.05 Orthogroups_2024-Update
Potri.011G070100 No alias WRKY DNA-binding protein 65 0.02 Orthogroups_2024-Update
Potri.013G153400 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Potri.014G090300 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Potri.015G099200 No alias WRKY DNA-binding protein 75 0.07 Orthogroups_2024-Update
Potri.016G128300 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Potri.016G137900 No alias WRKY DNA-binding protein 70 0.05 Orthogroups_2024-Update
Potri.017G079500 No alias WRKY DNA-binding protein 72 0.04 Orthogroups_2024-Update
Pp1s39_217V6 No alias wrky transcription 0.02 Orthogroups_2024-Update
Pp1s426_27V6 No alias wrky transcription 0.02 Orthogroups_2024-Update
Seita.1G062100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.1G334400.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.3G282000.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G197100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G001000.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.5G032600.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G132800.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G256700.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G306000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G132800.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G218000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G302000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G088600.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G123100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G421700.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G381300.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G389000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G138400.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G199400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G200700.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G248400.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G276000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G285500.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G341100.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G065900.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G117400.2 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G028600.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G034800.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G068900.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G092100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G100500.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G171600.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.009G206800.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G247300.2 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g095630 No alias WRKY transcription factor 41 0.03 Orthogroups_2024-Update
Solyc02g072190 No alias WRKY transcription factor 79 0.02 Orthogroups_2024-Update
Solyc03g095770 No alias WRKY transcription factor 80 0.02 Orthogroups_2024-Update
Solyc05g053380 No alias WRKY transcription factor 48 0.03 Orthogroups_2024-Update
Solyc05g055750 No alias WRKY transcription factor 34 0.03 Orthogroups_2024-Update
Solyc10g005680 No alias WRKY transcription factor 15 0.02 Orthogroups_2024-Update
Solyc12g006170 No alias WRKY transcription factor 14 0.02 Orthogroups_2024-Update
Solyc12g042590 No alias WRKY transcription factor 43 0.02 Orthogroups_2024-Update
Sopen02g033030 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen03g035820 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update
Sopen08g004130 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen08g029910 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update
Sopen12g002120 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 105 162
No external refs found!