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  5. PSME_00049135-RA

PSME_00049135-RA


Description : (at4g25090 : 149.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), FAD-binding 8 (InterPro:IPR013112), EF-HAND 2 (InterPro:IPR018249), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1). & (reliability: 298.0) & (original description: no original description)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049135-RA
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
106894 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
183259 No alias respiratory burst oxidase protein F 0.02 Orthogroups_2024-Update
266977 No alias respiratory burst oxidase protein F 0.04 Orthogroups_2024-Update
81185 No alias respiratory burst oxidase protein F 0.09 Orthogroups_2024-Update
At3g45810 No alias Putative respiratory burst oxidase homolog protein J... 0.03 Orthogroups_2024-Update
Bradi2g19090 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
GRMZM2G426953 No alias ferric reductase-like transmembrane component family protein 0.08 Orthogroups_2024-Update
LOC_Os08g35210 No alias ferric reductase, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.002G214200.1 No alias NADPH-oxidase *(Rboh) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013121 Fe_red_NAD-bd_6 89 116
IPR013112 FAD-bd_8 30 71
IPR013121 Fe_red_NAD-bd_6 117 168
No external refs found!