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  5. Sopen06g014550

Sopen06g014550


Description : MuDR family transposase


Gene families : OG_42_0001054 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g014550
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Solyc01g067450 No alias No description available 0.02 Orthogroups_2024-Update
Solyc02g031720 No alias No description available 0.01 Orthogroups_2024-Update
Solyc03g096340 No alias No description available 0.01 Orthogroups_2024-Update
Solyc04g014590 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g019640 No alias No description available 0.01 Orthogroups_2024-Update
Sopen02g038420 No alias MuDR family transposase 0.01 Orthogroups_2024-Update
Sopen03g007840 No alias MULE transposase domain 0.02 Orthogroups_2024-Update
Sopen03g017650 No alias MULE transposase domain 0.01 Orthogroups_2024-Update
Sopen03g024810 No alias MULE transposase domain 0.01 Orthogroups_2024-Update
Sopen03g025320 No alias MULE transposase domain 0.02 Orthogroups_2024-Update
Sopen04g014920 No alias MULE transposase domain 0.01 Orthogroups_2024-Update
Sopen04g018010 No alias MULE transposase domain 0.02 Orthogroups_2024-Update
Sopen09g030880 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen11g025620 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen12g007590 No alias hypothetical protein 0.01 Orthogroups_2024-Update
Sopen12g010850 No alias hypothetical protein 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004332 Transposase_MuDR 285 344
IPR018289 MULE_transposase_dom 479 568
IPR007527 Znf_SWIM 625 654
No external refs found!