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  5. PSME_00049305-RA

PSME_00049305-RA


Description : (at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 347.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 864.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049305-RA
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
93690 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
A4A49_04895 No alias putative lrr receptor-like serinethreonine-protein kinase 0.02 Orthogroups_2024-Update
A4A49_07134 No alias putative lrr receptor-like serinethreonine-protein kinase 0.03 Orthogroups_2024-Update
At2g24130 No alias Leucine-rich receptor-like protein kinase family protein... 0.03 Orthogroups_2024-Update
At3g47110 No alias Putative receptor-like protein kinase At3g47110... 0.03 Orthogroups_2024-Update
Bradi1g01432 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi1g01985 No alias EF-TU receptor 0.05 Orthogroups_2024-Update
Bradi1g32160 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi3g48760 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g03660 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Bradi4g10998 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g11740 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g12990 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g16068 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Bradi4g16116 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g30827 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g42020 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi5g25117 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Brara.F01770.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.J01572.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G322348 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.01G152200 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.02G206300 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
Glyma.07G147800 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.08G128900 No alias EF-TU receptor 0.04 Orthogroups_2024-Update
Glyma.09G217500 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Glyma.13G268100 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.17G071700 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.18G199200 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G039970.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
HORVU1Hr1G086400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
HORVU2Hr1G107150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G127100.9 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
HORVU5Hr1G041390.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G095120.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
HORVU6Hr1G002290.6 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
HORVU6Hr1G038550.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
HORVU6Hr1G044140.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
HORVU6Hr1G090130.4 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
HORVU7Hr1G007520.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
HORVU7Hr1G108450.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g05870 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g33950 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os02g01800 No alias receptor-like protein kinase precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g11930 No alias receptor-like protein kinase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40240 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g15600 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g38490 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10310 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g36140 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g36160 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g46970 No alias receptor-like protein kinase 5 precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g47210 No alias receptor-like protein kinase 5 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427338g0010 No alias (at5g41180 : 90.5) leucine-rich repeat transmembrane... 0.03 Orthogroups_2024-Update
MA_10432898g0010 No alias (at3g47570 : 310.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_10435578g0010 No alias (at3g47570 : 335.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_10435743g0020 No alias (at1g35710 : 155.0) Protein kinase family protein with... 0.03 Orthogroups_2024-Update
MA_10436851g0010 No alias (at5g46330 : 411.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
MA_153816g0010 No alias (at3g47110 : 363.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_161654g0010 No alias (at2g24130 : 293.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_168077g0010 No alias (at3g47110 : 623.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_173608g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_180135g0010 No alias (at3g47580 : 92.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_45217g0010 No alias (at3g47570 : 301.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_738611g0010 No alias (at1g25320 : 101.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
MA_7910488g0010 No alias (at3g47110 : 125.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
MA_805205g0020 No alias (at2g24130 : 159.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_8334663g0010 No alias (at5g20480 : 141.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
MA_84062g0010 No alias (at5g20480 : 322.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
MA_8708888g0010 No alias (at1g25320 : 155.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_87248g0010 No alias (at2g24130 : 330.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
Mp3g14080.1 No alias Probable leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
PSME_00008693-RA No alias (at3g47570 : 355.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00014185-RA No alias (at3g24240 : 256.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00016355-RA No alias (at3g47570 : 606.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00016859-RA No alias (at5g46330 : 555.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00018686-RA No alias (at3g47110 : 573.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00027859-RA No alias (at4g08850 : 291.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00029302-RA No alias (at5g46330 : 580.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00030073-RA No alias (at5g46330 : 338.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00030826-RA No alias (at2g24130 : 523.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00032507-RA No alias (at5g46330 : 369.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00032810-RA No alias (at5g46330 : 206.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00035635-RA No alias (at3g47110 : 648.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00036348-RA No alias (at2g24130 : 481.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.07 Orthogroups_2024-Update
PSME_00042474-RA No alias (at3g47110 : 591.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00043336-RA No alias (at4g20140 : 343.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00043437-RA No alias (at3g12610 : 154.0) Plays role in DNA-damage... 0.07 Orthogroups_2024-Update
PSME_00050999-RA No alias (at5g46330 : 144.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.05 Orthogroups_2024-Update
PSME_00053316-RA No alias (at2g24130 : 617.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00053750-RA No alias (at4g20140 : 428.0) Encodes GASSHO1 (GSO1), a putative... 0.06 Orthogroups_2024-Update
PSME_00055178-RA No alias (at5g46330 : 248.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00055531-RA No alias (at5g46330 : 107.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00055533-RA No alias (at3g47110 : 628.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00056074-RA No alias (at5g07280 : 194.0) Encodes EMS1 (EXCESS... 0.03 Orthogroups_2024-Update
Potri.003G184100 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
Potri.004G060100 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Pp1s185_8V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Pp1s40_196V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Seita.4G046600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G105200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Seita.5G106100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G106400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G106500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Seita.8G157300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.J030600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.001G064700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.002G075000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G069601.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.003G070025.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.004G091500.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G065000.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G131600.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.06 Orthogroups_2024-Update
Sobic.008G007400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.05 Orthogroups_2024-Update
Sobic.008G061500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Solyc02g068880 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc02g070890 No alias Ontology_term=GO:0004675 0.03 Orthogroups_2024-Update
Solyc02g072440 No alias Leucine-rich repeat protein kinase family protein,... 0.03 Orthogroups_2024-Update
Solyc02g072480 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.02 Orthogroups_2024-Update
Solyc03g006080 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.03 Orthogroups_2024-Update
Solyc04g012190 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g006010 No alias Leucine-rich receptor-like protein kinase family protein... 0.03 Orthogroups_2024-Update
Solyc07g006770 No alias Receptor-like protein kinase (AHRD V3.3 *** RPK1_IPONI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 145 184
IPR001611 Leu-rich_rpt 215 236
IPR001611 Leu-rich_rpt 601 622
IPR001611 Leu-rich_rpt 999 1055
IPR001611 Leu-rich_rpt 334 388
IPR001611 Leu-rich_rpt 431 488
IPR001611 Leu-rich_rpt 849 908
IPR001611 Leu-rich_rpt 738 777
No external refs found!