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  5. PSME_00049426-RA

PSME_00049426-RA


Description : (at5g14230 : 573.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 1146.0) & (original description: no original description)


Gene families : OG_42_0001604 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001604_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049426-RA
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g25960 No alias ankyrin repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00044629-RA No alias (at5g14230 : 484.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 429 501
IPR020683 Ankyrin_rpt-contain_dom 329 403
IPR020683 Ankyrin_rpt-contain_dom 241 318
No external refs found!