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  5. PSME_00049438-RA

PSME_00049438-RA


Description : (at3g47570 : 582.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 388.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1164.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049438-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi5g03977 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Brara.B02809.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
GRMZM2G084248 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.07G155800 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Glyma.13G268100 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G095120.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
LOC_Os01g33950 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_10237903g0010 No alias (at3g47570 : 172.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
MA_10430058g0010 No alias (at3g11080 : 114.0) receptor like protein 35 (RLP35);... 0.03 Orthogroups_2024-Update
MA_159836g0010 No alias (at2g24130 : 563.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
MA_173608g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_4617178g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_61359g0010 No alias (at1g34110 : 339.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_723275g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_7910488g0010 No alias (at3g47110 : 125.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_805205g0020 No alias (at2g24130 : 159.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
MA_948744g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00014024-RA No alias (at2g24130 : 458.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00014185-RA No alias (at3g24240 : 256.0) Leucine-rich repeat receptor-like... 0.05 Orthogroups_2024-Update
PSME_00014258-RA No alias (at3g47570 : 579.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00021673-RA No alias (at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative... 0.05 Orthogroups_2024-Update
PSME_00024176-RA No alias (at4g20140 : 447.0) Encodes GASSHO1 (GSO1), a putative... 0.06 Orthogroups_2024-Update
PSME_00025380-RA No alias (at3g24240 : 244.0) Leucine-rich repeat receptor-like... 0.06 Orthogroups_2024-Update
PSME_00027031-RA No alias (at3g47570 : 470.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00027859-RA No alias (at4g08850 : 291.0) Leucine-rich repeat receptor-like... 0.06 Orthogroups_2024-Update
PSME_00030106-RA No alias (at3g47110 : 609.0) Leucine-rich repeat protein kinase... 0.01 Orthogroups_2024-Update
PSME_00031091-RA No alias (at5g46330 : 205.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00031122-RA No alias (at5g46330 : 295.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
PSME_00034090-RA No alias (at5g46330 : 744.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00035635-RA No alias (at3g47110 : 648.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00038472-RA No alias (at5g46330 : 359.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00040102-RA No alias (at2g24130 : 93.6) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00041027-RA No alias (at3g24240 : 280.0) Leucine-rich repeat receptor-like... 0.05 Orthogroups_2024-Update
PSME_00042187-RA No alias (at2g24130 : 489.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00042474-RA No alias (at3g47110 : 591.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00042483-RA No alias (at3g47570 : 568.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00043336-RA No alias (at4g20140 : 343.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00044449-RA No alias (at5g20480 : 591.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
PSME_00049418-RA No alias (at3g47570 : 274.0) Leucine-rich repeat protein kinase... 0.01 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00051245-RA No alias (at1g35710 : 388.0) Protein kinase family protein with... 0.05 Orthogroups_2024-Update
PSME_00053316-RA No alias (at2g24130 : 617.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00055160-RA No alias (at5g46330 : 382.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00055178-RA No alias (at5g46330 : 248.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00055531-RA No alias (at5g46330 : 107.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00056030-RA No alias (at2g26330 : 241.0) Homologous to receptor protein... 0.05 Orthogroups_2024-Update
Pp1s185_8V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Seita.1G185000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.4G177200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.4G231200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.4G231800.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.7G239900.1 No alias flagellin receptor kinase component of FLS2-BAK1... 0.02 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.8G157300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G068100.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.005G065000.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.005G205300.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Sobic.006G030400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.009G040175.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g072480 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.03 Orthogroups_2024-Update
Solyc03g118330 No alias Receptor-kinase, putative (AHRD V3.3 *-* B9RVA8_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 436 454
IPR013210 LRR_N_plant-typ 26 65
IPR001611 Leu-rich_rpt 488 544
IPR001611 Leu-rich_rpt 364 423
IPR000719 Prot_kinase_dom 677 887
No external refs found!