1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00049464-RA

PSME_00049464-RA


Description : (q41144|stc_ricco : 631.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 618.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (reliability: 1236.0) & (original description: no original description)


Gene families : OG_42_0000081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049464-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
270352 No alias sugar transporter protein 7 0.02 Orthogroups_2024-Update
A4A49_07453 No alias sugar transport protein 8 0.04 Orthogroups_2024-Update
A4A49_31174 No alias sugar carrier protein c 0.04 Orthogroups_2024-Update
At5g23270 No alias Sugar transport protein 11... 0.03 Orthogroups_2024-Update
Bradi1g59420 No alias sugar transporter 1 0.03 Orthogroups_2024-Update
Bradi4g16060 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g28000 No alias sugar transporter 14 0.04 Orthogroups_2024-Update
Bradi5g12030 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Brara.C04266.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
Brara.F02793.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
GRMZM2G029153 No alias sugar transporter protein 7 0.02 Orthogroups_2024-Update
Glyma.01G146700 No alias sugar transporter 14 0.03 Orthogroups_2024-Update
Glyma.09G284200 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G284600 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G249500 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G144300 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G013480.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
HORVU1Hr1G075970.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
HORVU2Hr1G064160.12 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G079620.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
HORVU2Hr1G079690.3 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
HORVU3Hr1G102860.7 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
LOC_Os03g11900 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03960 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g41190 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_130810g0010 No alias (at5g26340 : 744.0) Encodes a protein with high... 0.04 Orthogroups_2024-Update
MA_385361g0010 No alias (at4g02050 : 352.0) sugar transporter protein 7 (STP7);... 0.03 Orthogroups_2024-Update
Mp1g19310.1 No alias monosaccharide transporter (STP) 0.02 Orthogroups_2024-Update
Mp1g27640.1 No alias monosaccharide transporter (STP) 0.02 Orthogroups_2024-Update
PSME_00019075-RA No alias (at4g02050 : 701.0) sugar transporter protein 7 (STP7);... 0.03 Orthogroups_2024-Update
PSME_00027801-RA No alias (at4g02050 : 674.0) sugar transporter protein 7 (STP7);... 0.04 Orthogroups_2024-Update
PSME_00050123-RA No alias (q41144|stc_ricco : 639.0) Sugar carrier protein C -... 0.04 Orthogroups_2024-Update
Potri.004G233500 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G090700 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Potri.007G073900 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G089800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G204900.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.2G205100.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
Seita.4G029600.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Seita.6G043500.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.9G488700.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
Seita.9G579300.1 No alias monosaccharide transporter *(STP) 0.05 Orthogroups_2024-Update
Sobic.002G338500.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
Solyc02g079220 No alias Sugar transporter protein 1 0.03 Orthogroups_2024-Update
Sopen03g024250 No alias Sugar (and other) transporter 0.04 Orthogroups_2024-Update
Sopen04g029280 No alias Sugar (and other) transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 27 492
No external refs found!