1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00049466-RA

PSME_00049466-RA


Description : (at4g10500 : 344.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q05964|fl3h_diaca : 207.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 674.0) & (original description: no original description)


Gene families : OG_42_0000393 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049466-RA

Target Alias Description ECC score Gene Family Method Actions
229355 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.06 Orthogroups_2024-Update
406018 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
GRMZM2G099467 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.05 Orthogroups_2024-Update
Glyma.18G273200 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
MA_9118954g0010 No alias (at4g10500 : 394.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00012736-RA No alias (at4g10490 : 400.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00015460-RA No alias (at4g10500 : 329.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
PSME_00023800-RA No alias (at4g10490 : 377.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00029936-RA No alias (at4g10500 : 359.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
PSME_00047984-RA No alias (at4g10500 : 350.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
Pp1s46_151V6 No alias flavonol synthase flavanone 3- 0.02 Orthogroups_2024-Update
Sopen06g035310 No alias 2OG-Fe(II) oxygenase superfamily 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR026992 DIOX_N 48 148
IPR005123 Oxoglu/Fe-dep_dioxygenase 206 300
No external refs found!