Sopen06g014800

Description : Putative tRNA binding domain

Gene families : OG_42_0002556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g014800
Cluster	HCCA clusters: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
Brara.E00181.1	No alias	methionine-tRNA ligase	0.03	Orthogroups_2024-Update
Pp1s129_152V6	No alias	F24G16.250; tRNA-binding region domain-containing...	0.02	Orthogroups_2024-Update
Pp1s66_190V6	No alias	methionyl-trna synthetase	0.02	Orthogroups_2024-Update
Solyc06g048610	No alias	Nucleic acid-binding, OB-fold-like protein (AHRD V3.3...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002547	tRNA-bd_dom	231	325

External Links

No external refs found!