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  5. PSME_00049637-RA

PSME_00049637-RA


Description : (at4g39700 : 166.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049637-RA
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
A4A49_11785 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g62660 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G085086 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G088190.1 No alias Unknown function 0.07 Orthogroups_2024-Update
MA_46972g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp2g01720.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Seita.5G138300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 34 88
No external refs found!