PSME_00049648-RA

Description : (at1g62300 : 176.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00049648-RA

Target	Alias	Description	ECC score	Gene Family Method
At4g23810	No alias	Probable WRKY transcription factor 53...	0.02	Orthogroups_2024-Update
At4g31800	No alias	WRKY like transcription factor...	0.03	Orthogroups_2024-Update
Brara.B02887.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C02724.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Brara.D02346.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K00459.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
GRMZM2G040298	No alias	WRKY DNA-binding protein 69	0.02	Orthogroups_2024-Update
GRMZM2G398506	No alias	WRKY family transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.05G123600	No alias	WRKY DNA-binding protein 35	0.02	Orthogroups_2024-Update
Glyma.13G267400	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Glyma.18G092200	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.18G208800	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
HORVU1Hr1G088300.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
HORVU1Hr1G090170.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
HORVU3Hr1G050590.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g58420	No alias	WRKY6, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g63810	No alias	WRKY80, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46060	No alias	WRKY36, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49620	No alias	WRKY19, expressed	0.01	Orthogroups_2024-Update
LOC_Os05g50610	No alias	WRKY8, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g25060	No alias	WRKY76, expressed	0.01	Orthogroups_2024-Update
MA_164675g0010	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.01	Orthogroups_2024-Update
MA_23415g0010	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.01	Orthogroups_2024-Update
MA_74833g0010	No alias	(at5g15130 : 181.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_91468g0010	No alias	(at4g01720 : 124.0) member of WRKY Transcription Factor;...	0.01	Orthogroups_2024-Update
MA_93790g0010	No alias	(at1g29860 : 110.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00039003-RA	No alias	(at1g29860 : 112.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00039099-RA	No alias	(at3g01970 : 111.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.002G164900	No alias	WRKY DNA-binding protein 43	0.02	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.01	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Potri.006G133200	No alias	WRKY family transcription factor family protein	0.01	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.01	Orthogroups_2024-Update
Potri.013G090300	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Potri.013G090400	No alias	WRKY DNA-binding protein 55	0.02	Orthogroups_2024-Update
Potri.013G153400	No alias	WRKY DNA-binding protein 33	0.01	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.01	Orthogroups_2024-Update
Potri.017G104800	No alias	WRKY DNA-binding protein 35	0.02	Orthogroups_2024-Update
Seita.3G131100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Seita.5G307700.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.005G013500.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g104550	No alias	WRKY transcription factor 9	0.02	Orthogroups_2024-Update
Solyc10g009550	No alias	LOW QUALITY:WRKY transcription factor 42	0.02	Orthogroups_2024-Update
Sopen07g024390	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	166	223

External Links

No external refs found!

PSME_00049648-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation