- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at1g09070 : 104.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)
Gene families : OG_42_0000703 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000703_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00049774-RA | |
| Cluster | HCCA clusters: Cluster_185 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.I05280.1 | No alias | ER-anchored membrane contact site protein *(SRC2) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G160113 | No alias | soybean gene regulated by cold-2 | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G020030.2 | No alias | ER-anchored membrane contact site protein *(SRC2) | 0.03 | Orthogroups_2024-Update | |
| Seita.3G267500.1 | No alias | ER-anchored membrane contact site protein *(SRC2) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G442200.1 | No alias | ER-anchored membrane contact site protein *(SRC2) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
| CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| CC | GO:0030286 | dynein complex | IEP | Predicted GO |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000008 | C2_dom | 5 | 105 |
| No external refs found! |