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  5. PSME_00049804-RA

PSME_00049804-RA


Description : (at3g48090 : 134.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049804-RA
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G152739 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
MA_10385961g0010 No alias (at3g52430 : 139.0) Encodes a lipase-like gene that is... 0.02 Orthogroups_2024-Update
PSME_00010076-RA No alias (at3g52430 : 162.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
PSME_00014388-RA No alias (at3g48090 : 135.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
PSME_00033222-RA No alias (at3g48090 : 124.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
PSME_00045875-RA No alias (at3g48090 : 129.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00046982-RA No alias (at3g52430 : 199.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
PSME_00048984-RA No alias (at3g48090 : 89.4) Component of R gene-mediated disease... 0.05 Orthogroups_2024-Update
PSME_00049141-RA No alias (at3g48090 : 123.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 100 220
No external refs found!