PSME_00049816-RA


Description : (at1g67900 : 654.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 392.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1308.0) & (original description: no original description)


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049816-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
A4A49_15521 No alias root phototropism protein 3 0.02 Orthogroups_2024-Update
A4A49_24985 No alias root phototropism protein 2 0.02 Orthogroups_2024-Update
Brara.K01221.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
GRMZM2G159161 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM2G172506 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.11G061200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
LOC_Os03g41350 No alias BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.03 Orthogroups_2024-Update
MA_10429476g0010 No alias (at5g67385 : 302.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
MA_7675g0010 No alias (at5g48800 : 618.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
PSME_00019671-RA No alias (at5g64330 : 730.0) Involved in blue light response... 0.03 Orthogroups_2024-Update
PSME_00027120-RA No alias (q9lef0|gpx4_mescr : 145.0) Probable phospholipid... 0.05 Orthogroups_2024-Update
Potri.005G146400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Sobic.007G029700.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Solyc07g043130 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g066730 No alias phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Sopen01g048130 No alias NPH3 family 0.04 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen08g002830 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen09g029510 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 217 501
No external refs found!