Description : (at3g53740 : 141.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 756 Blast hits to 755 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 356; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (p52866|rl36_dauca : 113.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (reliability: 282.0) & (original description: no original description)
Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00049847-RA | |
Cluster | HCCA clusters: Cluster_240 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
439710 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
At2g37600 | No alias | 60S ribosomal protein L36-1... | 0.07 | Orthogroups_2024-Update | |
Bradi2g23260 | No alias | Ribosomal protein L36e family protein | 0.07 | Orthogroups_2024-Update | |
Brara.C01889.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.D02287.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.E00749.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.I03660.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Cre12.g484050 | No alias | Ribosomal protein L36e family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.10G233900 | No alias | Ribosomal protein L36e family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.19G047300 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
HORVU1Hr1G072270.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G009610.2 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Kfl00110_0150 | kfl00110_0150_v1.1 | (at2g37600 : 143.0) Ribosomal protein L36e family... | 0.01 | Orthogroups_2024-Update | |
LOC_Os01g62350 | No alias | 60S ribosomal protein L36-2, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10430792g0010 | No alias | (at3g53740 : 140.0) Ribosomal protein L36e family... | 0.03 | Orthogroups_2024-Update | |
Mp1g05460.1 | No alias | component RPL36 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
Potri.004G057000 | No alias | Ribosomal protein L36e family protein | 0.03 | Orthogroups_2024-Update | |
Potri.012G142600 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
Pp1s249_65V6 | No alias | 60s ribosomal protein l36-2 | 0.06 | Orthogroups_2024-Update | |
Pp1s34_151V6 | No alias | 60s ribosomal protein l36-2 | 0.04 | Orthogroups_2024-Update | |
Pp1s84_102V6 | No alias | 60s ribosomal protein l36-2 | 0.05 | Orthogroups_2024-Update | |
Seita.5G376500.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.009G163800.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Solyc03g025520 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc06g036050 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen03g004360 | No alias | Ribosomal protein L36e | 0.07 | Orthogroups_2024-Update | |
Sopen06g011800 | No alias | Ribosomal protein L36e | 0.06 | Orthogroups_2024-Update | |
evm.model.contig_3387.3 | No alias | (at2g37600 : 125.0) Ribosomal protein L36e family... | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00021493.69 | No alias | (at2g37600 : 127.0) Ribosomal protein L36e family... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
CC | GO:0005666 | RNA polymerase III complex | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006383 | transcription by RNA polymerase III | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
CC | GO:0061617 | MICOS complex | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000509 | Ribosomal_L36e | 8 | 101 |
No external refs found! |