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  5. PSME_00049893-RA

PSME_00049893-RA


Description : (at3g51730 : 93.6) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description)


Gene families : OG_42_0001267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049893-RA
Cluster HCCA clusters: Cluster_247


Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007856 SapB_1 73 109
IPR008138 SapB_2 113 138
No external refs found!