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  5. PSME_00050006-RA

PSME_00050006-RA


Description : (at3g48090 : 113.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050006-RA
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_12178 No alias lipase-like pad4 0.05 Orthogroups_2024-Update
Brara.C00642.1 No alias component *(SAG101) of EDS1-PAD4/SAG101 signalling heterodimers 0.02 Orthogroups_2024-Update
PSME_00044214-RA No alias (at3g48090 : 123.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00048418-RA No alias (at3g48080 : 216.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
PSME_00048984-RA No alias (at3g48090 : 89.4) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00049141-RA No alias (at3g48090 : 123.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00054488-RA No alias (at3g48090 : 129.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 65 141
No external refs found!