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  5. PSME_00050034-RA

PSME_00050034-RA


Description : (at4g16820 : 374.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description)


Gene families : OG_42_0000082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050034-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_02601 No alias phospholipase a1-igamma2, chloroplastic 0.01 Orthogroups_2024-Update
A4A49_06327 No alias phospholipase a1-igamma3, chloroplastic 0.01 Orthogroups_2024-Update
A4A49_15963 No alias phospholipase a1-igamma1, chloroplastic 0.01 Orthogroups_2024-Update
A4A49_16668 No alias phospholipase a1-igamma1, chloroplastic 0.01 Orthogroups_2024-Update
A4A49_18741 No alias phospholipase a1-iigamma 0.01 Orthogroups_2024-Update
A4A49_19230 No alias phospholipase a1-iigamma 0.05 Orthogroups_2024-Update
A4A49_42852 No alias phospholipase a1-ii 1 0.01 Orthogroups_2024-Update
Bradi2g45270 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
Brara.A00968.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Brara.A01852.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Glyma.03G159000 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G251600 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
HORVU1Hr1G044630.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU3Hr1G058700.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
HORVU3Hr1G089140.2 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
HORVU7Hr1G072960.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
LOC_Os01g46250 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g67430 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g67450 No alias lipase, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g49830 No alias lipase class 3 family protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os10g41270 No alias triacylglycerol lipase like protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os11g19340 No alias lipase, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os11g27980 No alias lipase class 3 family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g41980 No alias lipase class 3 family protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_10426658g0020 No alias (at1g51440 : 196.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10430133g0010 No alias (at1g06800 : 469.0) Encodes a lipase that hydrolyzes... 0.02 Orthogroups_2024-Update
MA_10434747g0010 No alias (at2g30550 : 280.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10435754g0010 No alias (at1g30370 : 235.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
MA_1516g0010 No alias (at2g30550 : 271.0) Encodes a lipase that hydrolyzes... 0.01 Orthogroups_2024-Update
MA_73124g0010 No alias (at1g51440 : 283.0) Encodes a lipase that hydrolyzes... 0.01 Orthogroups_2024-Update
MA_7986586g0010 No alias (at2g30550 : 246.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_8497143g0010 No alias (at2g30550 : 254.0) Encodes a lipase that hydrolyzes... 0.01 Orthogroups_2024-Update
PSME_00007319-RA No alias (at2g30550 : 238.0) Encodes a lipase that hydrolyzes... 0.02 Orthogroups_2024-Update
PSME_00027904-RA No alias (at1g06800 : 535.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00041390-RA No alias (at1g51440 : 81.3) Encodes a lipase that hydrolyzes... 0.01 Orthogroups_2024-Update
PSME_00050880-RA No alias (at2g31690 : 334.0) encodes a triacylglycerol lipase... 0.01 Orthogroups_2024-Update
PSME_00054288-RA No alias (at1g06800 : 337.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
Potri.001G263200 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
Potri.009G057900 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G026400 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
Potri.015G026500 No alias alpha/beta-Hydrolases superfamily protein 0.01 Orthogroups_2024-Update
Pp1s56_261V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.3G063800.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Seita.3G302300.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Seita.5G132200.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Seita.5G246000.1 No alias phospholipase-A1 *(PC-PLA1) 0.07 Orthogroups_2024-Update
Seita.5G416000.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Seita.8G107700.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Seita.9G320000.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Sobic.003G390900.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Sobic.004G297600.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Sobic.005G111400.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Sobic.010G159900.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Sobic.010G160000.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Sobic.010G160033.1 No alias phospholipase-A1 *(PC-PLA1) 0.01 Orthogroups_2024-Update
Solyc02g076990 No alias Phospholipase A1 (AHRD V3.3 *** A5YW95_CAPAN) 0.01 Orthogroups_2024-Update
Solyc02g077020 No alias Phospholipase A1 (AHRD V3.3 *** A5YW95_CAPAN) 0.01 Orthogroups_2024-Update
Solyc10g038170 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g036010 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g021930 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g021950 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g022050 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g022070 No alias Lipase (class 3) 0.02 Orthogroups_2024-Update
Sopen02g022320 No alias Lipase (class 3) 0.01 Orthogroups_2024-Update
Sopen12g006270 No alias Lipase (class 3) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 254 420
No external refs found!