1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00050088-RA

PSME_00050088-RA


Description : "(at3g48520 : 268.0) member of CYP94B; ""cytochrome P450, family 94, subfamily B, polypeptide 3"" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050088-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
151517 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.04 Orthogroups_2024-Update
A4A49_08073 No alias alkane hydroxylase mah1 0.03 Orthogroups_2024-Update
A4A49_08283 No alias alkane hydroxylase mah1 0.04 Orthogroups_2024-Update
A4A49_29237 No alias cytochrome p450 94c1 0.03 Orthogroups_2024-Update
At1g13150 No alias Cytochrome P450, family 86, subfamily C, polypeptide 4... 0.03 Orthogroups_2024-Update
At1g65340 No alias Cytochrome P450, family 96, subfamily A, polypeptide 3... 0.03 Orthogroups_2024-Update
Bradi1g75730 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.02 Orthogroups_2024-Update
Brara.B03850.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.06 Orthogroups_2024-Update
Brara.F01665.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.04 Orthogroups_2024-Update
Brara.G01703.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.H00726.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.02 Orthogroups_2024-Update
Brara.I01629.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.05 Orthogroups_2024-Update
GRMZM2G123037 No alias cytochrome P450, family 86, subfamily C, polypeptide 1 0.03 Orthogroups_2024-Update
GRMZM5G810393 No alias cytochrome P450, family 94, subfamily D, polypeptide 2 0.02 Orthogroups_2024-Update
Glyma.03G008100 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.04 Orthogroups_2024-Update
Glyma.03G077600 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.03G077800 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.03G160300 No alias cytochrome P450, family 94, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.11G185700 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.02 Orthogroups_2024-Update
Glyma.14G192500 No alias cytochrome P450, family 86, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.16G057100 No alias cytochrome P450, family 94, subfamily B, polypeptide 2 0.04 Orthogroups_2024-Update
Glyma.20G002700 No alias cytochrome P450, family 86, subfamily B, polypeptide 1 0.02 Orthogroups_2024-Update
HORVU4Hr1G083930.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
LOC_Os10g38110 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436419g0010 No alias "(at2g45510 : 416.0) member of CYP704A; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_221187g0010 No alias "(at5g23190 : 405.0) cytochrome P450 CYP86B1, nuclear... 0.03 Orthogroups_2024-Update
PSME_00031806-RA No alias "(at2g45510 : 86.7) member of CYP704A; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00032251-RA No alias "(at2g45510 : 438.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
Potri.002G042200 No alias cytochrome P450, family 94, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.013G075600 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.03 Orthogroups_2024-Update
Pp1s307_4V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.5G351900.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Seita.8G120900.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.04 Orthogroups_2024-Update
Sobic.001G450100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.001G451700.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.001G510300.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.009G155500.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.03 Orthogroups_2024-Update
Solyc07g006890 No alias Cytochrome P450, putative (AHRD V3.3 *** B9S4U5_RICCO) 0.03 Orthogroups_2024-Update
Solyc11g065770 No alias Cytochrome P450, putative (AHRD V3.3 *** B9S4U7_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 14 263
No external refs found!