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  5. PSME_00050123-RA

PSME_00050123-RA


Description : (q41144|stc_ricco : 639.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 616.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (reliability: 1232.0) & (original description: no original description)


Gene families : OG_42_0000081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050123-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_07453 No alias sugar transport protein 8 0.04 Orthogroups_2024-Update
A4A49_31174 No alias sugar carrier protein c 0.04 Orthogroups_2024-Update
Bradi1g59420 No alias sugar transporter 1 0.04 Orthogroups_2024-Update
Bradi4g16060 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g28000 No alias sugar transporter 14 0.02 Orthogroups_2024-Update
Brara.C04266.1 No alias monosaccharide transporter *(STP) 0.06 Orthogroups_2024-Update
Brara.I00997.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Glyma.09G194400 No alias sugar transporter 14 0.02 Orthogroups_2024-Update
Glyma.10G249400 No alias Major facilitator superfamily protein 0.08 Orthogroups_2024-Update
Glyma.16G109100 No alias sugar transporter 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G013480.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
HORVU2Hr1G041080.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
HORVU2Hr1G064150.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
HORVU2Hr1G064160.12 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G079620.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
HORVU3Hr1G018700.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
HORVU3Hr1G018740.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
HORVU3Hr1G102860.7 No alias monosaccharide transporter *(STP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G067450.7 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
HORVU5Hr1G055850.2 No alias monosaccharide transporter *(STP) 0.05 Orthogroups_2024-Update
LOC_Os02g36450 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g11900 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38220 No alias transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427602g0010 No alias (at1g77210 : 383.0) AtSTP14 belongs to the family of... 0.04 Orthogroups_2024-Update
MA_130810g0010 No alias (at5g26340 : 744.0) Encodes a protein with high... 0.04 Orthogroups_2024-Update
Mp1g00620.1 No alias monosaccharide transporter (STP) 0.02 Orthogroups_2024-Update
PSME_00014549-RA No alias (at5g26340 : 737.0) Encodes a protein with high... 0.03 Orthogroups_2024-Update
PSME_00014550-RA No alias (at5g26340 : 734.0) Encodes a protein with high... 0.03 Orthogroups_2024-Update
PSME_00027802-RA No alias (at4g02050 : 744.0) sugar transporter protein 7 (STP7);... 0.04 Orthogroups_2024-Update
PSME_00035846-RA No alias (q07423|hex6_ricco : 580.0) Hexose carrier protein HEX6... 0.03 Orthogroups_2024-Update
PSME_00049464-RA No alias (q41144|stc_ricco : 631.0) Sugar carrier protein C -... 0.04 Orthogroups_2024-Update
Potri.010G089800 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Pp1s438_15V6 No alias hexose transporter 0.04 Orthogroups_2024-Update
Seita.1G079800.1 No alias monosaccharide transporter *(STP) 0.04 Orthogroups_2024-Update
Seita.2G205100.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.4G029600.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Seita.6G043500.1 No alias monosaccharide transporter *(STP) 0.06 Orthogroups_2024-Update
Seita.7G120200.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.7G120300.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Sobic.001G543500.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Sobic.002G338500.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Sobic.006G101900.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Solyc03g005140 No alias Sugar transporter protein 7 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 28 478
No external refs found!