PSME_00050286-RA

Description : (at3g03050 : 1763.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (reliability: 3526.0) & (original description: no original description)

Gene families : OG_42_0000743 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00050286-RA
Cluster	HCCA clusters: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
230382	No alias	cellulose synthase-like D3	0.02	Orthogroups_2024-Update
A4A49_18783	No alias	cellulose synthase-like protein d4	0.02	Orthogroups_2024-Update
A4A49_26528	No alias	cellulose synthase-like protein d2	0.04	Orthogroups_2024-Update
Bradi3g22345	No alias	cellulose synthase like D4	0.03	Orthogroups_2024-Update
Bradi4g05027	No alias	cellulose synthase-like D5	0.04	Orthogroups_2024-Update
Brara.E01734.1	No alias	mannan synthase *(CSLD)	0.02	Orthogroups_2024-Update
Brara.J00126.1	No alias	mannan synthase *(CSLD)	0.02	Orthogroups_2024-Update
GRMZM2G015886	No alias	cellulose synthase-like D5	0.04	Orthogroups_2024-Update
GRMZM2G044269	No alias	cellulose synthase like D4	0.04	Orthogroups_2024-Update
GRMZM2G061764	No alias	cellulose synthase-like D1	0.04	Orthogroups_2024-Update
Glyma.01G232500	No alias	cellulose synthase-like D3	0.03	Orthogroups_2024-Update
Glyma.02G286100	No alias	cellulose synthase like D4	0.02	Orthogroups_2024-Update
Glyma.12G017600	No alias	cellulose synthase-like D3	0.05	Orthogroups_2024-Update
MA_595526g0010	No alias	(at3g03050 : 1729.0) encodes a cellulose synthase like...	0.07	Orthogroups_2024-Update
MA_60546g0010	No alias	(at3g03050 : 1550.0) encodes a cellulose synthase like...	0.03	Orthogroups_2024-Update
PSME_00000097-RA	No alias	(at3g03050 : 1474.0) encodes a cellulose synthase like...	0.04	Orthogroups_2024-Update
Pp1s111_50V6	No alias	cellulose synthase a catalytic subunit 3	0.02	Orthogroups_2024-Update
Pp1s269_16V6	No alias	cellulose synthase-like glycosyltransferase family 2	0.01	Orthogroups_2024-Update
Pp1s57_129V6	No alias	cellulose synthase a catalytic subunit 3	0.02	Orthogroups_2024-Update
Pp1s68_133V6	No alias	cellulose synthase-like glycosyltransferase family 2	0.02	Orthogroups_2024-Update
Seita.3G337900.1	No alias	mannan synthase *(CSLD)	0.03	Orthogroups_2024-Update
Sobic.010G008600.1	No alias	mannan synthase (CSLD) & catalytic component (CesA) of...	0.03	Orthogroups_2024-Update
Sobic.010G146000.1	No alias	mannan synthase *(CSLD)	0.03	Orthogroups_2024-Update
Solyc03g097050	No alias	Cellulose synthase-like protein (AHRD V3.3 *** L0ATQ4_POPTO)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	InterProScan predictions
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	InterProScan predictions
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	386	1136

External Links

No external refs found!

PSME_00050286-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation