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PSME_00050317-RA


Description : (at2g43710 : 277.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p22337|stad_ricco : 277.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (reliability: 554.0) & (original description: no original description)


Gene families : OG_42_0000579 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050317-RA
Cluster HCCA clusters: Cluster_836

Target Alias Description ECC score Gene Family Method Actions
Bradi3g17670 No alias Plant stearoyl-acyl-carrier-protein desaturase family protein 0.01 Orthogroups_2024-Update
HORVU3Hr1G061520.5 No alias delta-9 stearoyl-ACP desaturase *(AAD) & EC_1.14... 0.02 Orthogroups_2024-Update
HORVU3Hr1G092740.1 No alias delta-9 stearoyl-ACP desaturase *(AAD) & EC_1.14... 0.02 Orthogroups_2024-Update
MA_10433963g0010 No alias (p22337|stad_ricco : 555.0) Acyl-[acyl-carrier-protein]... 0.01 Orthogroups_2024-Update
PSME_00019961-RA No alias (p22337|stad_ricco : 604.0) Acyl-[acyl-carrier-protein]... 0.01 Orthogroups_2024-Update
PSME_00041047-RA No alias (p22337|stad_ricco : 516.0) Acyl-[acyl-carrier-protein]... 0.04 Orthogroups_2024-Update
Seita.5G402700.1 No alias delta-9 stearoyl-ACP desaturase *(AAD) & EC_1.14... 0.01 Orthogroups_2024-Update
Solyc06g059700 No alias Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g059710 No alias Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g005530 No alias Fatty acid desaturase 0.01 Orthogroups_2024-Update
Sopen11g004460 No alias Fatty acid desaturase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEA InterProScan predictions
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005067 Fatty_acid_desaturase-2 49 193
No external refs found!