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  5. PSME_00050445-RA

PSME_00050445-RA


Description : (at5g40350 : 171.0) Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. ; myb domain protein 24 (MYB24); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 21 (TAIR:AT3G27810.1); Has 8771 Blast hits to 8031 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 465; Plants - 5769; Viruses - 6; Other Eukaryotes - 1744 (source: NCBI BLink). & (q4jl76|myba2_orysa : 152.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050445-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_00094 No alias transcription factor myb108 0.06 Orthogroups_2024-Update
A4A49_00243 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_11142 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.04 Orthogroups_2024-Update
A4A49_19615 No alias transcription repressor myb4 0.02 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.02 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
AC206901.3_FG005 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
At1g18570 No alias Transcription factor MYB51... 0.02 Orthogroups_2024-Update
At1g22640 No alias MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1] 0.02 Orthogroups_2024-Update
At2g47190 No alias ATMYB2 [Source:UniProtKB/TrEMBL;Acc:Q39028] 0.03 Orthogroups_2024-Update
At3g06490 No alias Transcription factor MYB108... 0.03 Orthogroups_2024-Update
At3g61250 No alias Transcription factor MYB41... 0.06 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.05 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.05 Orthogroups_2024-Update
Bradi2g44770 No alias myb domain protein 21 0.04 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.C02944.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.G03643.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.04 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00496.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I05267.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.02 Orthogroups_2024-Update
GRMZM2G003406 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
GRMZM2G070849 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G124715 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
GRMZM2G143046 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G158700 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.04 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.06 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
GRMZM2G335358 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.02G006800 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Glyma.03G006600 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.05 Orthogroups_2024-Update
Glyma.06G178600 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Glyma.07G235900 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Glyma.09G032100 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.05 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.10G010300 No alias myb domain protein 78 0.03 Orthogroups_2024-Update
Glyma.10G206500 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Glyma.10G236400 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.07 Orthogroups_2024-Update
Glyma.12G218200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.14G039200 No alias myb domain protein 120 0.02 Orthogroups_2024-Update
Glyma.15G034500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.19G024700 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.19G224600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Glyma.20G013000 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.05 Orthogroups_2024-Update
Glyma.20G184200 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G084170.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
HORVU2Hr1G120340.2 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G036900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38740 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g45060 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g10350 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.09 Orthogroups_2024-Update
MA_10429682g0010 No alias (p20026|myb1_horvu : 172.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.07 Orthogroups_2024-Update
MA_137934g0010 No alias (at3g23250 : 215.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.05 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.05 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.07 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00024743-RA No alias (at1g63910 : 232.0) member of MYB3R- and R2R3- type MYB-... 0.03 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00031553-RA No alias (p20026|myb1_horvu : 244.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
PSME_00033098-RA No alias (at3g24310 : 169.0) snapdragon myb protein 305 homolog... 0.04 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00037152-RA No alias (at3g13540 : 192.0) Encodes a member of the MYB family... 0.05 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.08 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.08 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
PSME_00053584-RA No alias (at3g61250 : 171.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.001G224500 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Potri.004G088100 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Potri.005G074500 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.005G112000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.006G123400 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G221800 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.007G067600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.008G180800 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.010G123000 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.010G141000 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.012G140500 No alias myb domain protein 19 0.02 Orthogroups_2024-Update
Potri.013G056400 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.014G111200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.04 Orthogroups_2024-Update
Potri.015G067700 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.02 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.019G050900 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s257_83V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s284_57V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Pp1s326_37V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.07 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
Seita.1G309600.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.09 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Seita.4G008000.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.04 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G161400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Seita.7G284800.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
Seita.7G285100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G181600.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.07 Orthogroups_2024-Update
Sobic.003G142300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G280000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G303400.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Sobic.008G055700.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G055800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Solyc01g005660 No alias R2R3MYB transcription factor 5 0.02 Orthogroups_2024-Update
Solyc01g057910 No alias R2R3MYB transcription factor 2 0.05 Orthogroups_2024-Update
Solyc02g089190 No alias R2R3MYB transcription factor 29 0.02 Orthogroups_2024-Update
Solyc08g005870 No alias R2R3MYB transcription factor 8 0.03 Orthogroups_2024-Update
Sopen02g038370 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g004950 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g019610 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen09g003070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 75 118
IPR001005 SANT/Myb 22 67
No external refs found!