PSME_00050468-RA


Description : (at1g09560 : 201.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 184.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 402.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050468-RA
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
A4A49_13720 No alias nectarin-1 0.03 Orthogroups_2024-Update
At3g05930 No alias Germin-like protein subfamily 2 member 3... 0.04 Orthogroups_2024-Update
Bradi1g04907 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Orthogroups_2024-Update
Bradi2g08790 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
GRMZM2G161097 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Orthogroups_2024-Update
Glyma.13G153154 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G224300 No alias germin-like protein 5 0.03 Orthogroups_2024-Update
Glyma.20G110100 No alias RmlC-like cupins superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G220900 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G107930.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G090190.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G066380.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G089450.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g09080 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05840 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00054465-RA No alias (at1g09560 : 210.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
Potri.013G064000 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Sobic.007G151300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g113570 No alias Germin-like protein 0.02 Orthogroups_2024-Update
Sopen01g044840 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 70 212
IPR006045 Cupin_1 214 279
No external refs found!