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  5. PSME_00050874-RA

PSME_00050874-RA


Description : "(at5g23190 : 287.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050874-RA
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_02082 No alias cytochrome p450 94b1 0.02 Orthogroups_2024-Update
A4A49_04089 No alias cytochrome p450 94b1 0.02 Orthogroups_2024-Update
A4A49_08073 No alias alkane hydroxylase mah1 0.03 Orthogroups_2024-Update
At1g65340 No alias Cytochrome P450, family 96, subfamily A, polypeptide 3... 0.03 Orthogroups_2024-Update
At1g66030 No alias CYP96A14P [Source:UniProtKB/TrEMBL;Acc:A0A178WDD7] 0.03 Orthogroups_2024-Update
Bradi1g75730 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.02 Orthogroups_2024-Update
Bradi4g19187 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.02 Orthogroups_2024-Update
Bradi5g18920 No alias cytochrome P450, family 704, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Brara.B03850.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.02 Orthogroups_2024-Update
Brara.E00512.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.F01665.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.F03856.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.I00002.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
Brara.I05639.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
GRMZM2G040728 No alias cytochrome P450, family 94, subfamily D, polypeptide 2 0.02 Orthogroups_2024-Update
GRMZM2G091822 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.02 Orthogroups_2024-Update
Glyma.03G077600 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.02 Orthogroups_2024-Update
Glyma.03G077800 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.02 Orthogroups_2024-Update
Glyma.03G160200 No alias cytochrome P450, family 94, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G073700.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.03 Orthogroups_2024-Update
HORVU2Hr1G001150.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
HORVU4Hr1G083930.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
LOC_Os10g38110 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04290 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
MA_7127108g0010 No alias "(at5g23190 : 208.0) cytochrome P450 CYP86B1, nuclear... 0.04 Orthogroups_2024-Update
PSME_00023193-RA No alias "(at3g56630 : 428.0) member of CYP94D; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00025657-RA No alias "(at2g45510 : 436.0) member of CYP704A; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00028213-RA No alias "(at2g45510 : 430.0) member of CYP704A; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00029544-RA No alias "(at5g63450 : 284.0) member of CYP94B; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00031049-RA No alias "(at5g23190 : 287.0) cytochrome P450 CYP86B1, nuclear... 0.02 Orthogroups_2024-Update
PSME_00034567-RA No alias "(at5g23190 : 227.0) cytochrome P450 CYP86B1, nuclear... 0.03 Orthogroups_2024-Update
PSME_00044316-RA No alias "(at2g45510 : 430.0) member of CYP704A; ""cytochrome... 0.02 Orthogroups_2024-Update
PSME_00051142-RA No alias "(at4g00360 : 452.0) Encodes a member of the CYP86A... 0.04 Orthogroups_2024-Update
Potri.003G129100 No alias cytochrome P450, family 86, subfamily A, polypeptide 7 0.02 Orthogroups_2024-Update
Potri.008G183300 No alias cytochrome P450, family 86, subfamily C, polypeptide 1 0.03 Orthogroups_2024-Update
Pp1s307_4V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Pp1s332_42V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Pp1s37_346V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.3G299800.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.02 Orthogroups_2024-Update
Seita.8G120900.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Seita.9G347500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.001G450100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G427500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.008G036000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc01g094100 No alias Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTZ5_THECC) 0.03 Orthogroups_2024-Update
Solyc02g014730 No alias Cytochrome P450 (AHRD V3.3 *** A0A103YA00_CYNCS) 0.01 Orthogroups_2024-Update
Solyc08g081220 No alias Cytochrome P450 (AHRD V3.3 *** A0A103XJH9_CYNCS) 0.02 Orthogroups_2024-Update
Sopen07g002990 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen10g031330 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 41 377
No external refs found!