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  5. PSME_00050893-RA

PSME_00050893-RA


Description : (at3g12360 : 123.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)


Gene families : OG_42_0000679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050893-RA
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Bradi2g54340 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
GRMZM2G042107 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
GRMZM2G123977 No alias Ankyrin repeat family protein 0.04 Orthogroups_2024-Update
Glyma.03G000167 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Glyma.20G241200 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G079730.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10427678g0010 No alias (at3g09550 : 525.0) Ankyrin repeat family protein;... 0.04 Orthogroups_2024-Update
Potri.010G212700 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Potri.016G080700 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Seita.5G373200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G233100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G348400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc05g054830 No alias Ankyrin repeat family protein (AHRD V3.3 *** AT3G12360.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 115 181
No external refs found!