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  5. PSME_00050897-RA

PSME_00050897-RA


Description : (at3g22840 : 152.0) Encodes an early light-inducible protein.; EARLY LIGHT-INDUCABLE PROTEIN (ELIP1); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G14690.1); Has 319 Blast hits to 319 proteins in 50 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (p11432|eli_pea : 148.0) Early light-induced protein, chloroplast precursor (ELIP) - Pisum sativum (Garden pea) & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050897-RA

Target Alias Description ECC score Gene Family Method Actions
Brara.C03891.1 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
HORVU1Hr1G067070.3 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 31 87
No external refs found!