PSME_00050917-RA

Description : (at1g74930 : 122.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; ORA47; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 5510 Blast hits to 5399 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5503; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00050917-RA
Cluster	HCCA clusters: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
80895	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
A4A49_23010	No alias	ethylene-responsive transcription factor 2	0.05	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.02	Orthogroups_2024-Update
At1g36060	No alias	Ethylene-responsive transcription factor ERF055...	0.02	Orthogroups_2024-Update
At1g74930	No alias	Ethylene-responsive transcription factor ERF018...	0.05	Orthogroups_2024-Update
At5g11590	No alias	Dehydration-responsive element-binding protein 3...	0.03	Orthogroups_2024-Update
Bradi2g52370	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G061487	No alias	related to AP2 4	0.04	Orthogroups_2024-Update
GRMZM2G084264	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G255500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.04G201700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G110000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Glyma.08G035000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G018100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G236600	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os04g46400	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_8574268g0010	No alias	(at5g11590 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_896002g0010	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Mp6g08690.1	No alias	transcription factor (DREB)	0.02	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.015G136300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s149_253V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s155_21V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G240500.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.03	Orthogroups_2024-Update
Solyc02g093130	No alias	AP2/EREBP transcription factor_1	0.03	Orthogroups_2024-Update
Solyc04g054910	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc09g089930	No alias	ethylene responsive factor E.2	0.02	Orthogroups_2024-Update
Solyc12g049560	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen03g005140	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g029310	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g026910	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g028640	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	24	72

External Links

No external refs found!

PSME_00050917-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation