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  5. Sopen06g015560

Sopen06g015560


Description : START domain


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g015560
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
At1g05230 No alias AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8] 0.05 Orthogroups_2024-Update
At1g17920 No alias Uncharacterized protein At1g17920 (Fragment)... 0.04 Orthogroups_2024-Update
At1g34650 No alias Homeobox-leucine zipper protein HDG10... 0.04 Orthogroups_2024-Update
At1g73360 No alias Homeobox-leucine zipper protein HDG11... 0.02 Orthogroups_2024-Update
At2g32370 No alias Homeobox-leucine zipper protein HDG3... 0.05 Orthogroups_2024-Update
At4g17710 No alias Homeobox-leucine zipper protein HDG4... 0.03 Orthogroups_2024-Update
Brara.C02895.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E01141.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02319.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K01431.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G026643 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.02 Orthogroups_2024-Update
GRMZM2G122897 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
GRMZM2G123140 No alias homeobox-7 0.02 Orthogroups_2024-Update
Glyma.09G168000 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Glyma.20G142200 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
Potri.001G137800 No alias homeobox-7 0.03 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s84_236V6 No alias tpa: tpa_inf: class iv hd-zip protein hdz41 0.02 Orthogroups_2024-Update
Seita.2G114000.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g091630 No alias cutin deficient 2 0.03 Orthogroups_2024-Update
Solyc05g015020 No alias Homeobox-leucine zipper protein (AHRD V3.3 *-* A0A059UE00_9POAL) 0.03 Orthogroups_2024-Update
Solyc08g076370 No alias Homeobox-leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g011940 No alias Homeobox-leucine zipper family protein (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen03g028900 No alias START domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 47 102
IPR002913 START_lipid-bd_dom 175 382
No external refs found!