1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00051048-RA

PSME_00051048-RA


Description : (at5g06390 : 407.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 814.0) & (original description: no original description)


Gene families : OG_42_0002109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051048-RA
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi1g57040 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.04 Orthogroups_2024-Update
Brara.A03392.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Brara.D00595.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Potri.016G066500 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.02 Orthogroups_2024-Update
Pp1s402_51V6 No alias MHF15.9; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G038200.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc10g081720 No alias fasciclin superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 295 413
IPR000782 FAS1_domain 60 186
No external refs found!