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  5. PSME_00051217-RA

PSME_00051217-RA


Description : (at5g26340 : 511.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 392.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1022.0) & (original description: no original description)


Gene families : OG_42_0000081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051217-RA
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G843141 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G146700 No alias sugar transporter 14 0.04 Orthogroups_2024-Update
Kfl00090_0290 kfl00090_0290_v1.1 (at5g26340 : 584.0) Encodes a protein with high... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 28 362
No external refs found!