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  5. PSME_00051277-RA

PSME_00051277-RA


Description : (at2g39210 : 629.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 1258.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051277-RA
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
A4A49_18187 No alias protein nuclear fusion defective 4 0.04 Orthogroups_2024-Update
A4A49_21347 No alias protein nuclear fusion defective 4 0.03 Orthogroups_2024-Update
A4A49_34756 No alias protein nuclear fusion defective 4 0.03 Orthogroups_2024-Update
At1g18940 No alias F14D16.8 [Source:UniProtKB/TrEMBL;Acc:Q9LMD4] 0.06 Orthogroups_2024-Update
Bradi1g05180 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Bradi1g12440 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Bradi4g07330 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G024808 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G458494 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G574534 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G169400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G112900 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G113000 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G069980.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update
HORVU5Hr1G106960.3 No alias UMF23-type solute transporter 0.06 Orthogroups_2024-Update
LOC_Os04g31924 No alias nodulin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g08850 No alias nodulin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g29950 No alias nodulin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g44060 No alias nodulin, putative, expressed 0.05 Orthogroups_2024-Update
MA_323184g0010 No alias (at2g39210 : 515.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
MA_481350g0010 No alias (at2g28120 : 219.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00046657-RA No alias (at2g39210 : 308.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
Potri.012G098900 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G405800.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update
Seita.7G074700.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update
Seita.9G139000.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
Solyc02g094190 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT3G01930.2) 0.03 Orthogroups_2024-Update
Solyc05g055540 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G39210.1) 0.04 Orthogroups_2024-Update
Solyc11g008180 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc11g008200 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen03g029970 No alias Nodulin-like 0.03 Orthogroups_2024-Update
Sopen05g033980 No alias Nodulin-like 0.03 Orthogroups_2024-Update
Sopen10g033400 No alias Nodulin-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 18 265
IPR011701 MFS 387 571
No external refs found!