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  5. PSME_00051384-RA

PSME_00051384-RA


Description : (at1g63350 : 167.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051384-RA
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Brara.K00100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_355252g0010 No alias (at4g26090 : 192.0) Encodes a plasma membrane protein... 0.04 Orthogroups_2024-Update
PSME_00009855-RA No alias (at1g12280 : 248.0) LRR and NB-ARC domains-containing... 0.06 Orthogroups_2024-Update
PSME_00048939-RA No alias (at1g15890 : 95.5) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00056619-RA No alias (at4g27220 : 229.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00056632-RA No alias (at1g61310 : 186.0) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
Potri.001G405025 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 165 255
No external refs found!