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  5. PSME_00051402-RA

PSME_00051402-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0002280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051402-RA
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
PSME_00001630-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00006193-RA No alias (at1g24090 : 100.0) RNase H family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00008241-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00017604-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00019861-RA No alias (at1g24090 : 97.1) RNase H family protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 147 214
IPR002156 RNaseH_domain 362 447
No external refs found!