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  5. PSME_00051407-RA

PSME_00051407-RA


Description : (p28002|comt1_medsa : 208.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 192.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051407-RA
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
At1g21110 No alias Indole glucosinolate O-methyltransferase 3... 0.05 Orthogroups_2024-Update
Brara.H01339.1 No alias EC_2.1 transferase transferring one-carbon group 0.09 Orthogroups_2024-Update
Brara.K00306.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Glyma.09G094400 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
Glyma.14G200800 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.14G200900 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
Glyma.20G213500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G001570.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
HORVU7Hr1G117890.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Kfl00158_0170 kfl00158_0170_v1.... (at5g54160 : 162.0) A caffeic acid/5-hydroxyferulic acid... 0.01 Orthogroups_2024-Update
LOC_Os04g09604 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10172789g0010 No alias (q9fqy8|comt1_capan : 191.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_165197g0010 No alias (q8w013|comt1_catro : 372.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_1665780g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_5226589g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00016835-RA No alias (p28002|comt1_medsa : 153.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00032996-RA No alias (q8w013|comt1_catro : 410.0) Caffeic acid... 0.06 Orthogroups_2024-Update
PSME_00037662-RA No alias (q8w013|comt1_catro : 274.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00041841-RA No alias (q8w013|comt1_catro : 270.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00045308-RA No alias (p28002|comt1_medsa : 243.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00050669-RA No alias (q8w013|comt1_catro : 270.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00052154-RA No alias (q8w013|comt1_catro : 255.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00052715-RA No alias (p28002|comt1_medsa : 235.0) Caffeic acid... 0.02 Orthogroups_2024-Update
Pp1s116_1V6 No alias alkaloid o-methyltransferase related 0.02 Orthogroups_2024-Update
Sobic.001G346800.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sobic.005G216100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.005G216200.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Solyc10g008120 No alias O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) 0.04 Orthogroups_2024-Update
Sopen10g003990 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 154 360
IPR012967 Plant_MeTrfase_dimerisation 42 90
No external refs found!