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  5. PSME_00051570-RA

PSME_00051570-RA


Description : (at4g27220 : 246.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 472.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051570-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Bradi2g52150 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Brara.A03110.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G095140.34 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10431079g0020 No alias (at1g12280 : 99.8) LRR and NB-ARC domains-containing... 0.08 Orthogroups_2024-Update
MA_10435995g0040 No alias (at4g27190 : 188.0) NB-ARC domain-containing disease... 0.05 Orthogroups_2024-Update
PSME_00009853-RA No alias (at1g12280 : 271.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00033628-RA No alias (at4g27220 : 254.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 556 616
IPR002182 NB-ARC 181 398
No external refs found!