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  5. PSME_00051919-RA

PSME_00051919-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00051919-RA
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_27951 No alias squamosa promoter-binding-like protein 8 0.03 Orthogroups_2024-Update
At1g27360 No alias Squamosa promoter-binding-like protein 11... 0.02 Orthogroups_2024-Update
At5g50570 No alias Squamosa promoter-binding-like protein 13B... 0.03 Orthogroups_2024-Update
Bradi2g59110 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Bradi4g34667 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Brara.A03153.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03810.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G01764.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I03020.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03021.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.02 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.02 Orthogroups_2024-Update
Cre07.g345050 No alias squamosa promoter binding protein-like 10 0.03 Orthogroups_2024-Update
Cre16.g686100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.01 Orthogroups_2024-Update
GRMZM2G036297 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
GRMZM2G101511 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
GRMZM5G878561 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.01G075900 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
Glyma.06G168600 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.12G162999 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Mp1g10020.1 No alias transcription factor (SBP) 0.03 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Pp1s194_61V6 No alias squamosa promoter-binding 0.03 Orthogroups_2024-Update
Pp1s23_77V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Seita.1G069300.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc07g053810 No alias Squamosa promoter binding protein 4 0.03 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 340 367
No external refs found!