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Description : (at4g39220 : 243.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)
Gene families : OG_42_0001247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00051978-RA | |
| Cluster | HCCA clusters: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18856 | No alias | protein rer1a | 0.02 | Orthogroups_2024-Update | |
| Brara.D01274.1 | No alias | membrane protein cargo receptor *(RER1) | 0.02 | Orthogroups_2024-Update | |
| Brara.G00200.1 | No alias | membrane protein cargo receptor *(RER1) | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_4470.3 | No alias | (at4g39220 : 132.0) Key player of retrieval of ER... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
| MF | GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0006486 | protein glycosylation | IEP | Predicted GO |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Predicted GO |
| BP | GO:0070085 | glycosylation | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004932 | Rer1 | 18 | 177 |
| No external refs found! |