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  5. PSME_00052052-RA

PSME_00052052-RA


Description : (at4g13650 : 551.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 165.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1102.0) & (original description: no original description)


Gene families : OG_42_0010804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052052-RA No neighbors in network


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 659 681
IPR002885 Pentatricopeptide_repeat 556 581
IPR002885 Pentatricopeptide_repeat 458 483
IPR002885 Pentatricopeptide_repeat 97 120
IPR002885 Pentatricopeptide_repeat 125 154
IPR002885 Pentatricopeptide_repeat 484 531
IPR002885 Pentatricopeptide_repeat 383 429
IPR002885 Pentatricopeptide_repeat 185 231
IPR002885 Pentatricopeptide_repeat 585 631
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 282 329
No external refs found!