Description : no hits & (original description: no original description)
Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00052149-RA | |
Cluster | HCCA clusters: Cluster_562 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.03G080400 | No alias | hAT transposon superfamily | 0.05 | Orthogroups_2024-Update | |
Glyma.08G294500 | No alias | hAT transposon superfamily | 0.02 | Orthogroups_2024-Update | |
Glyma.09G104100 | No alias | hAT transposon superfamily | 0.02 | Orthogroups_2024-Update | |
Glyma.13G192700 | No alias | hAT transposon superfamily | 0.03 | Orthogroups_2024-Update | |
PSME_00003940-RA | No alias | (at1g79740 : 137.0) hAT transposon superfamily;... | 0.03 | Orthogroups_2024-Update | |
PSME_00016751-RA | No alias | (at1g79740 : 133.0) hAT transposon superfamily;... | 0.05 | Orthogroups_2024-Update | |
PSME_00019385-RA | No alias | (at5g33406 : 84.7) hAT dimerisation domain-containing... | 0.04 | Orthogroups_2024-Update | |
PSME_00022489-RA | No alias | (at5g33406 : 99.0) hAT dimerisation domain-containing... | 0.04 | Orthogroups_2024-Update | |
PSME_00025529-RA | No alias | (at1g79740 : 126.0) hAT transposon superfamily;... | 0.03 | Orthogroups_2024-Update | |
PSME_00031287-RA | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
PSME_00033581-RA | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00039066-RA | No alias | (at3g17450 : 92.8) hAT dimerisation domain-containing... | 0.04 | Orthogroups_2024-Update | |
PSME_00041319-RA | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
PSME_00055084-RA | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00055607-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
PSME_00055841-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
Potri.004G193600 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Solyc02g043850 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Solyc12g076330 | No alias | No description available | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006862 | nucleotide transport | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
BP | GO:0008156 | negative regulation of DNA replication | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015301 | anion:anion antiporter activity | IEP | Predicted GO |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Predicted GO |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0048478 | replication fork protection | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Predicted GO |
MF | GO:0099516 | ion antiporter activity | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Predicted GO |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |