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  5. PSME_00052278-RA

PSME_00052278-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052278-RA
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
MA_10702g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_38396g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00004635-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00005792-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.015G100500 No alias Function unknown 0.02 Orthogroups_2024-Update
Solyc11g005890 No alias Chitinase 1, putative (AHRD V3.3 *** B9RU38_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!