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  5. PSME_00052317-RA

PSME_00052317-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001359 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052317-RA
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
PSME_00036712-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00051070-RA No alias (at1g80920 : 86.3) A nuclear encoded soluble protein... 0.06 Orthogroups_2024-Update
Sobic.010G210600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 31 81
No external refs found!