PSME_00052334-RA

Description : (at1g12570 : 469.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (reliability: 930.0) & (original description: no original description)

Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00052334-RA

Target	Alias	Description	ECC score	Gene Family Method
108291	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.02	Orthogroups_2024-Update
429523	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
Bradi4g28870	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.02	Orthogroups_2024-Update
Glyma.01G048800	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
Glyma.05G050100	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
Glyma.07G009900	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.06	Orthogroups_2024-Update
LOC_Os06g44540	No alias	HOTHEAD precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g31030	No alias	HOTHEAD precursor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g19930	No alias	HOTHEAD precursor, putative, expressed	0.02	Orthogroups_2024-Update
MA_41268g0010	No alias	(at1g12570 : 455.0) Glucose-methanol-choline (GMC)...	0.04	Orthogroups_2024-Update
PSME_00025174-RA	No alias	(at1g14190 : 453.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00025333-RA	No alias	(at1g14190 : 320.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00032064-RA	No alias	(at1g12570 : 349.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00032105-RA	No alias	(at1g14190 : 453.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00034434-RA	No alias	(at1g12570 : 458.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00038869-RA	No alias	(at1g14190 : 353.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00042692-RA	No alias	(at1g14190 : 441.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00047795-RA	No alias	(at1g73050 : 409.0) Glucose-methanol-choline (GMC)...	0.06	Orthogroups_2024-Update
PSME_00048086-RA	No alias	(at1g14185 : 365.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00049535-RA	No alias	(at1g14190 : 155.0) Glucose-methanol-choline (GMC)...	0.05	Orthogroups_2024-Update
PSME_00051118-RA	No alias	(at5g51950 : 373.0) Glucose-methanol-choline (GMC)...	0.06	Orthogroups_2024-Update
Potri.001G111500	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
Seita.1G271600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G138200.1	No alias	omega-hydroxy fatty acyl dehydrogenase *(HOTHEAD)	0.03	Orthogroups_2024-Update
Sobic.006G185600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc03g121600	No alias	Glucose-methanol-choline (GMC) oxidoreductase family...	0.03	Orthogroups_2024-Update
Solyc06g035580	No alias	Glucose-methanol-choline (GMC) oxidoreductase family...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predicted GO
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0019684	photosynthesis, light reaction	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000172	GMC_OxRdtase_N	62	346
IPR007867	GMC_OxRtase_C	413	562

External Links

No external refs found!

PSME_00052334-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation