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- Pseudotsuga menziesii
- Sequence
- PSME_00052423-RA
PSME_00052423-RA
Description : (at3g45780 : 217.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p15792|kpk1_phavu : 174.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 430.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00052423-RA | |
| Cluster | HCCA clusters: Cluster_110 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| At1g16440 | No alias | Serine/threonine-protein kinase RHS3... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g31620 | No alias | AGC kinase 1.5 | 0.02 | Orthogroups_2024-Update | |
| Bradi4g42600 | No alias | Protein kinase superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.F02004.1 | No alias | EC_2.7 transferase transferring phosphorus-containing group | 0.03 | Orthogroups_2024-Update | |
| Brara.G00568.1 | No alias | AGC-VIII protein kinase & EC_2.7 transferase... | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G020478 | No alias | Protein kinase superfamily protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G103559 | No alias | Protein kinase superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.03G193000 | No alias | Protein kinase superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.05G009200 | No alias | AGC (cAMP-dependent, cGMP-dependent and protein kinase... | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G015400 | No alias | D6 protein kinase like 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.16G070700 | No alias | D6 protein kinase like 2 | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G060500 | No alias | D6 protein kinase like 2 | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g38320 | No alias | AGC_PVPK_like_kin82y.14 - ACG kinases include homologs... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os10g41290 | No alias | AGC_PVPK_like_kin82y.17 - ACG kinases include homologs... | 0.02 | Orthogroups_2024-Update | |
| MA_10430800g0010 | No alias | (at5g47750 : 504.0) D6 protein kinase like 2 (D6PKL2);... | 0.04 | Orthogroups_2024-Update | |
| PSME_00034467-RA | No alias | (at3g20830 : 296.0) AGC (cAMP-dependent, cGMP-dependent... | 0.05 | Orthogroups_2024-Update | |
| PSME_00055271-RA | No alias | (at4g13000 : 269.0) AGC (cAMP-dependent, cGMP-dependent... | 0.09 | Orthogroups_2024-Update | |
| Potri.008G024000 | No alias | Protein kinase superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G127600.1 | No alias | AGC-VIII protein kinase & EC_2.7 transferase... | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G005700.1 | No alias | AGC-VIII protein kinase & EC_2.7 transferase... | 0.05 | Orthogroups_2024-Update | |
| Sobic.007G212100.1 | No alias | AGC-VIII protein kinase & EC_2.7 transferase... | 0.02 | Orthogroups_2024-Update | |
| Solyc02g093360 | No alias | Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU) | 0.03 | Orthogroups_2024-Update | |
| Sopen02g016940 | No alias | Protein kinase domain | 0.02 | Orthogroups_2024-Update | |
| Sopen02g037930 | No alias | Protein kinase domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_3404.15 | No alias | (at3g20830 : 217.0) AGC (cAMP-dependent, cGMP-dependent... | 0.01 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0000166 | nucleotide binding | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004672 | protein kinase activity | IEA | InterProScan predictions |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
| BP | GO:0006464 | cellular protein modification process | None | Extended |
| BP | GO:0006468 | protein phosphorylation | IEA | InterProScan predictions |
| BP | GO:0006793 | phosphorus metabolic process | None | Extended |
| BP | GO:0006796 | phosphate-containing compound metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| MF | GO:0008144 | drug binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| MF | GO:0016301 | kinase activity | None | Extended |
| BP | GO:0016310 | phosphorylation | None | Extended |
| MF | GO:0016740 | transferase activity | None | Extended |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | None | Extended |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | None | Extended |
| MF | GO:0017076 | purine nucleotide binding | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| MF | GO:0030554 | adenyl nucleotide binding | None | Extended |
| MF | GO:0032553 | ribonucleotide binding | None | Extended |
| MF | GO:0032555 | purine ribonucleotide binding | None | Extended |
| MF | GO:0032559 | adenyl ribonucleotide binding | None | Extended |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | None | Extended |
| MF | GO:0036094 | small molecule binding | None | Extended |
| BP | GO:0036211 | protein modification process | None | Extended |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| BP | GO:0043412 | macromolecule modification | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0044267 | cellular protein metabolic process | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:0097367 | carbohydrate derivative binding | None | Extended |
| MF | GO:0140096 | catalytic activity, acting on a protein | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR000719 | Prot_kinase_dom | 52 | 301 |
