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PSME_00052564-RA


Description : (q71v09|h4_capan : 147.0) Histone H4 (CaH4) - Capsicum annuum (Bell pepper) & (at5g59970 : 146.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052564-RA
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05980 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G029090.2 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Sobic.001G529400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 32 96
No external refs found!