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  5. PSME_00052727-RA

PSME_00052727-RA


Description : (p10290|mybc_maize : 194.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 186.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052727-RA
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_33530 No alias transcription factor myb26 0.02 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.02 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.03 Orthogroups_2024-Update
At4g09460 No alias Transcription repressor MYB6... 0.02 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.02 Orthogroups_2024-Update
Bradi1g51747 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.01 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G097636 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
GRMZM2G124715 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
GRMZM2G158700 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
GRMZM2G335358 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.02G247100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.09G032100 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
HORVU3Hr1G092820.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.02 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00018833-RA No alias (p20025|myb38_maize : 246.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00035306-RA No alias (at5g57620 : 246.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
PSME_00045448-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.01 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.01 Orthogroups_2024-Update
Seita.3G062400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G239400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G142300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.02 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G187001.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Solyc03g119370 No alias R2R3MYB transcription factor 62 0.01 Orthogroups_2024-Update
Solyc05g009230 No alias Myb domain protein (AHRD V3.3 *** K7PMP7_HEVBR) 0.02 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.02 Orthogroups_2024-Update
Sopen01g053540 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g001570 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g019610 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!