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  5. PSME_00052797-RA

PSME_00052797-RA


Description : (at3g13890 : 180.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20024|myb1_maize : 158.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 360.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052797-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_08581 No alias transcription factor myb36 0.01 Orthogroups_2024-Update
A4A49_19188 No alias transcription factor laf1 0.01 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.01 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.01 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.03 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.01 Orthogroups_2024-Update
At5g14340 No alias myb domain protein 40 [Source:TAIR;Acc:AT5G14340] 0.02 Orthogroups_2024-Update
At5g16770 No alias Myb domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KE69] 0.02 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.01 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Brara.B00350.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Brara.E00069.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.F02919.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.01 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G069325 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G335358 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.01 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.06G188400 No alias Duplicated homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.06G299900 No alias myb domain protein 14 0.01 Orthogroups_2024-Update
Glyma.07G073000 No alias myb domain protein 17 0.01 Orthogroups_2024-Update
Glyma.08G031300 No alias myb domain protein 68 0.01 Orthogroups_2024-Update
Glyma.09G261600 No alias myb domain protein 17 0.04 Orthogroups_2024-Update
Glyma.10G206500 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.02 Orthogroups_2024-Update
Glyma.11G133700 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.20G032900 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU4Hr1G028780.3 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G078300.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.01 Orthogroups_2024-Update
HORVU7Hr1G037060.3 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.01 Orthogroups_2024-Update
LOC_Os01g74410 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g45060 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.03 Orthogroups_2024-Update
MA_2026g0010 No alias (p20025|myb38_maize : 264.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
MA_355131g0010 No alias (at3g28910 : 186.0) transcription factor myb homologue;... 0.02 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
PSME_00031160-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.002G173900 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.01 Orthogroups_2024-Update
Potri.008G180800 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.01 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.01 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Potri.014G117000 No alias myb domain protein 2 0.02 Orthogroups_2024-Update
Potri.017G071500 No alias myb domain protein 21 0.01 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Seita.1G209100.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.01 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.01 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.01 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc05g053330 No alias MYB transcription factor (AHRD V3.3 *** Q39550_CRAPL) 0.02 Orthogroups_2024-Update
Solyc07g006750 No alias blind-like8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 70 114
IPR001005 SANT/Myb 17 64
No external refs found!