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  5. PSME_00052819-RA

PSME_00052819-RA


Description : (at2g45120 : 101.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 2765 Blast hits to 2574 proteins in 176 species: Archae - 0; Bacteria - 8; Metazoa - 1573; Fungi - 69; Plants - 926; Viruses - 18; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052819-RA
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
A4A49_10804 No alias zinc finger protein zat11 0.02 Orthogroups_2024-Update
At1g27730 No alias Zinc finger protein ZAT10... 0.02 Orthogroups_2024-Update
At4g35700 No alias At4g35700 [Source:UniProtKB/TrEMBL;Acc:O81801] 0.02 Orthogroups_2024-Update
At5g03510 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
Bradi1g16010 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Brara.C03744.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G061626 No alias C2H2-type zinc finger family protein 0.05 Orthogroups_2024-Update
GRMZM2G402027 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.10G045200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G040700 No alias C2H2-type zinc finger family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G097450.1 No alias C2H2-type transcription factor & C2H2-type subclass ZAT... 0.04 Orthogroups_2024-Update
HORVU2Hr1G097460.3 No alias C2H2-type transcription factor & C2H2-type subclass ZAT... 0.04 Orthogroups_2024-Update
HORVU5Hr1G112820.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g66570 No alias ZOS1-19 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38600 No alias ZOS5-09 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_93487g0010 No alias (at1g02040 : 120.0) C2H2-type zinc finger family... 0.05 Orthogroups_2024-Update
Mp4g11380.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
PSME_00025743-RA No alias (at3g60580 : 103.0) C2H2-like zinc finger protein;... 0.04 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.02 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.04 Orthogroups_2024-Update
Potri.001G235800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G062000 No alias zinc finger (C2H2 type) family protein 0.03 Orthogroups_2024-Update
Potri.009G166200 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Potri.016G098100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.3G062700.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Seita.8G247200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.9G034400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Solyc03g115450 No alias LOW QUALITY:Zinc finger protein 1 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g054650 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.02 Orthogroups_2024-Update
Solyc12g088400 No alias Zinc-finger protein (AHRD V3.3 *-* Q40899_PETHY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!