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  5. PSME_00052965-RA

PSME_00052965-RA


Description : (at1g69550 : 271.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (p93194|rpk1_iponi : 104.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 542.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052965-RA
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
MA_10245438g0010 No alias (at1g69550 : 134.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10428235g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10430204g0020 No alias (at1g69550 : 133.0) disease resistance protein... 0.06 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10437104g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_116648g0020 No alias (at1g69550 : 168.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_125758g0010 No alias (at1g69550 : 183.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_7670414g0010 No alias (at1g69550 : 195.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00008436-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00009594-RA No alias (at1g69550 : 125.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00013193-RA No alias (at1g69550 : 211.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00016728-RA No alias (at1g69550 : 234.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00025240-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00029256-RA No alias (at1g69550 : 97.4) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00031155-RA No alias (at1g69550 : 336.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035348-RA No alias (at1g69550 : 133.0) disease resistance protein... 0.1 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043433-RA No alias (at1g69550 : 248.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00051667-RA No alias (at1g69550 : 197.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00053796-RA No alias (at1g69550 : 180.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00055796-RA No alias (at1g69550 : 228.0) disease resistance protein... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026906 LRR_5 449 545
IPR026906 LRR_5 85 193
No external refs found!